BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B05LP1|AL428847
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1675 0.0
>3x_Contig1783
Length = 22123
Score = 1675 bits (843), Expect = 0.0
Identities = 858/865 (99%)
Strand = Plus / Minus
Query: 1 attcgaagacttatttagatgatggtagtctttgatcattaaatattacatacatacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13814 attcgaagacttatttagatgatggtagtctttgatcattaaatattacatacatacata 13755
Query: 61 aagatacaacttctccgggttaatttgctatcaagttatcaaatatggtggtgttctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13754 aagatacaacttctccgggttaatttgctatcaagttatcaaatatggtggtgttctgtc 13695
Query: 121 aatgctagtgagtggatcataattcaatcatcattagagtagttgaagcgctcgtctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13694 aatgctagtgagtggatcataattcaatcatcattagagtagttgaagcgctcgtctctt 13635
Query: 181 ctttaatcctattcatgtacataagcatttcttgaaaaattataaaggaaagtttagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13634 ctttaatcctattcatgtacataagcatttcttgaaaaattataaaggaaagtttagtca 13575
Query: 241 aagtttacatttaacatgtaagttaaggtttgaacgaaagattgacaatttcaagggtga 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 13574 aagtttacatttaacatgtaagtaaaggtttgaacgaaagattgacaatttcaagggtga 13515
Query: 301 atwagttcaattgaggcactagctgaccaataaaaaacaatcacacgttttaaaatgtct 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13514 ataagttcaattgaggcactagctgaccaataaaaaacaatcacacgttttaaaatgtct 13455
Query: 361 tttgagcgggacttagagagcattgctgaaggaaaagtatgttctaaccagttttcattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13454 tttgagcgggacttagagagcattgctgaaggaaaagtatgttctaaccagttttcattc 13395
Query: 421 cagttacagatttctacatcagaagcaaaccgaacattttactaactcatttcaacaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13394 cagttacagatttctacatcagaagcaaaccgaacattttactaactcatttcaacaaat 13335
Query: 481 tcaaactaatatgaaccagacacgtcaacaccatgcagtatgtgatgaatgawagtgata 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13334 tcaaactaatatgaaccagacacgtcaacaccatgcagtatgtgatgaatgaaagtgata 13275
Query: 541 attcaaagtgacagtttcaatctttggcgaaattgtcaaaagagagttatcattcttatg 600
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13274 attcaaagtgacagtatcaatctttggcgaaattgtcaaaagagagtaatcattcttatg 13215
Query: 601 gaacaaaaaatattaacaagatagagtcctgtgaccatgttatgaaccaggtttatcgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13214 gaacaaaaaatattaacaagatagagtcctgtgaccatgttatgaaccaggtttatcgtc 13155
Query: 661 gtcgtgatctgagatatggcttagctgatcgtctcgggatctctgacagagatagagaac 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13154 gtcgtgatctgagaaatggcttagctgatcgtctcgggatctctgacagagatagagaac 13095
Query: 721 ctcgtgggaaggatggtggtagaggaggctaccgtagtaagagaaactttaatgacagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13094 ctcgtgggaaggatggtggtagaggaggctaccgtagtaagagaaactttaatgacagaa 13035
Query: 781 ggaagagaataacgttactaagaattagaaacataccgttagagaccagtgactatgawa 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 13034 ggaagagaataacgttactaagaattagaaacataccgttagagaccagtgactatgaaa 12975
Query: 841 tcgaagattggatcaatgagatagg 865
|||||||||||||||||||||||||
Sbjct: 12974 tcgaagattggatcaatgagatagg 12950
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6955
Number of Sequences: 1807
Number of extensions: 6955
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)